BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004E05SP1|AL425262
(936 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1082 1775 0.0
>3x_Contig1082
Length = 4646
Score = 1775 bits (892), Expect = 0.0
Identities = 928/938 (98%), Gaps = 4/938 (0%)
Strand = Plus / Minus
Query: 1 gatcttcttaaccatgtaaccccatcttctcgccaatttcaaggcactctcaacggcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4457 gatcttcttaaccatgtaaccccatcttctcgccaatttcaaggcactctcaacggcttc 4398
Query: 61 agcacccgtgttcattggcaacacggattcgtaaccgaagaattcggtgacaaatttaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4397 agcacccgtgttcattggcaacacggattcgtaaccgaagaattcggtgacaaatttaga 4338
Query: 121 aaaggaagcaaaasaatcgttagagaaagctcttgaagatagagtsaatttggaagcttg 180
||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 4337 aaaggaagcaaaacaatcgttagagaaagctcttgaagatagagtcaatttggaagcttg 4278
Query: 181 atcgacaagggcttggataatatgaggatggcaatggccttggttgacggcagagtaagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4277 atcgacaagggcttggataatatgaggatggcaatggccttggttgacggcagagtaagc 4218
Query: 241 agacaagaaatccaaatattcctttccttcaggatcccaaacatgggcaccactagctct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4217 agacaagaaatccaaatattcctttccttcaggatcccaaacatgggcaccactagctct 4158
Query: 301 gctgaaaacaacaggcaaaggatggtatgttatgagcagagtattcttgttctgtattcg 360
||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct: 4157 gctgaaaacaacaggcaaaggatggta-gttatgagcagagtattcttgttc-gtattcg 4100
Query: 361 atagtcttggcagacgataagttcaattcagcagtgtcaaccatggtatttctctgtatt 420
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 4099 atagtcttggcagacgataagttcaattcagcagtgacaaccatggtatttctctgtatt 4040
Query: 421 gatacaattatattattaattsttattgctcattgaataatcaaaaagwgatattcaatg 480
||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 4039 gatacaattatattattaattcttattgctcattgaataatcaaaaagagatattcaatg 3980
Query: 481 tatgaaccatactgaatctaagtgactacttttaccaaagatgttgaatcgtcttctgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3979 tatgaaccatactgaatctaagtgactacttttaccaaagatgttgaatcgtcttctgtt 3920
Query: 541 cctcttgtctcttatatatgagaaaaaaaagatccgctttgaaaagttccatgtcatggc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3919 cctcttgtctcttatatatgagaaaaaaaagatccgctttgaaaagttccatgtcatggc 3860
Query: 601 atattccatgccattacaatttccaaatgacaacttgcgctag-tttagtcgaaagtccc 659
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 3859 atattccatgccattacaatttccaaatgacaacttgcgctagctttagtcgaaagtccc 3800
Query: 660 cgcaccgctcgttatcattatcacatagaggatattttgtcactctgtcactgccagaaa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3799 cgcaccgctcgttatcattatcacatagaggatattttgtcactctgtcactgccagaaa 3740
Query: 720 acgattaacattattccaaagggtagttaagtgaaagttaccccgatttatggtctgtgt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3739 acgattaacattattccaaagggtagttaagtgaaagttaccccgatttatggtctgtgt 3680
Query: 780 gaagaacgacagcgcgcgaaactgaattccgggttttgcgcgt-gtggactgtgaaacct 838
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 3679 gaagaacgacagcgcgcgaaactgaattccgggttttgcgcgtagtggactgtgaaacct 3620
Query: 839 cgctcttcgatgcacttaggggagtgaactttttcacaatataaaaagtgatcttaaagc 898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3619 cgctcttcgatgcacttaggggagtgaactttttcacaatataaaaagtgatcttaaagc 3560
Query: 899 tgttggttttgacaaagaaaacgatggracaggtgctt 936
||||||||||||||||||||||||||| ||||||||||
Sbjct: 3559 tgttggttttgacaaagaaaacgatggaacaggtgctt 3522
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6973
Number of Sequences: 1807
Number of extensions: 6973
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 1
length of query: 936
length of database: 10,358,551
effective HSP length: 16
effective length of query: 920
effective length of database: 10,329,639
effective search space: 9503267880
effective search space used: 9503267880
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)